CDS

Accession Number TCMCG017C09268
gbkey CDS
Protein Id OMP02574.1
Location join(17438..17509,17756..17866,17969..18102,18199..18292,18941..18997,19499..19550,19683..19806,19904..19991,20074..20173,20254..20306,20665..20841,20932..20969,21417..21519,21977..22125,22323..22381,22656..22774,23045..23173,23481..23609,23751..23816,23896..24153)
GeneID InterPro:IPR007807
Organism Corchorus olitorius
locus_tag COLO4_10987

Protein

Length 703aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014613.1
Definition hypothetical protein COLO4_10987 [Corchorus olitorius]
Locus_tag COLO4_10987

EGGNOG-MAPPER Annotation

COG_category H
Description RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14521        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0000154        [VIEW IN EMBL-EBI]
GO:0002097        [VIEW IN EMBL-EBI]
GO:0002101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008080        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016407        [VIEW IN EMBL-EBI]
GO:0016410        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0016747        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051391        [VIEW IN EMBL-EBI]
GO:0051392        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1904812        [VIEW IN EMBL-EBI]
GO:1990882        [VIEW IN EMBL-EBI]
GO:1990883        [VIEW IN EMBL-EBI]
GO:1990884        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATGAACTCAATGTCTTACCAATTTCATCTCATATAAGATCAATAAGTCCAGTTCCAGTCAATGAGGACTCTGAAGGGCTGTCAGAATCTGAACGGGAACTGAAGAACTTAAAAGAAGAATTAAATGAGGATTTTCCTGTTGGTCCTTTGATAAAAAAGTGTTGCACTCTGGATCAGGGAAAAGCTGTCATTACATTTCTTGATGCAATTTTGGACAAGAATCTGCGTAGCACAGTTGCTTTGCTCGCTGCTCGTGGGCGTGGAAAATCAGCTGCACTGGGGTTAGCAATTGCTGGTGCTATTGCTGCTGGGTATTCAAATATTTTTGTAACGGCACCTAGTCCTGAGAACTTAAAAACCTTGTTTGAATTTGTGGTCAAGGGTTTTGATGCTATTGAATATAAGGAACATCTAGATTATGATGTTGTGAAGAGTGTGAATCCTGAGTTCAAGAAGGCAACCCAATTGGAAGAGCAAAGCCAGGCATCTAAGGGCGTCGAGGGCTCCCTCTCTGGTCGGGTTTTTAAAAAGATAGAACTTAGTGAGTCAATTAGATATGCTCCTGCTGATCCCATAGAAACCTGGCTTAATGCTTTACTTTGCCTTGATGTTACAAATTCCGTACCCAGCATCAGCAGGTTACCTCCAACCAGTGAATGTGATCTCTACTATGTTAATCGGGATACACTTTTTTCTTATCACAAAGATAGTGAATTATTTTTGCAGCGGATGATGGCACTATATGTTTCTTCTCACTATAAAAATTCCCCAAATGACCTACAATTAATGGCTGATGCTCCAGCTCACCACTTATTTGTTTTACTAGGCCCTGTTGATGAGTCAAGAAATCAGCTTCCTGATATTTTGTGTGTTATCCAGGTTGCTCTTGAAGGTCAAATATCTCGTAAATCTGCAATGAAAAGCTTAAGTGATGGTTATCAACCTCATGGAGACCAAATACCATGGAAATTCTGCGAGCAGTTTCGAGATGCTGTTTTCCCAAGTCTTTCAGGTGCTCGTATTGTTCGCATTGCCACCCATCCCAGTGCTATGAGGCTTGGATATGGTTCTGCTGCTGTAGAACTCTTATCAAGGTACTATGAAGGACAATTAACTAATATATCTGAGCTAGATTTTGATGATGCTGAGGATAACCCACAAGGTCAACAACTCAGACTTACTGAAGCAGCAGAAAAGGTTTCTTTGTTGGAAGAAAATATTAAGCCCCGGACTGATCTTCCACCTTTGCTTGTACATCTGCATGAACGCCGCCCCGAGAAGCTCCATTATCTTGGTGTCTCCTTTGGGCTAACCTTAGACCTTTTTCGCTTCTGGAAGAAACACAATGATGATTTTGAGGTCAGTGGATCTGATGAGTGGGGCTTCTTCACCCCATTTTACAAAGATACAGAGCCTACACCTTCCACCTCAGATGAGCTTTCAAAGTTAATTAAGACTCTTTTGTCACCATATGATATGGGGCGGCTAAAAGATTATACAAATAATCTGATTGACTTCCTCTCGATTTCTGACATTGTGTCAACCCTTGCACATCTATATTTCCAAGAGAAGATCCCAGTTGCTTTATCATATGTTCAGGCCTCTATTTTGTTCTGCATGGGCTTGCAGAACCAAGATGTTTCTTATGTCGAGGAACAAATGAAAAAACTAGAAAGGCAGCAGATATTATCACAGTTTAAGAAGGTTATGATTAAGCTTTACAAATATTTATATGGAATTGCATCGAAGGAGATTGATTCTGCCTTACCTCGTCTAAAAGAAAGAGAACTGGAACCTCATAGTATCTCTGTCGATGAGGACCTCAATGATGGTGCAAAGAAAGTTGAGGAGGAAATGAGAGCCAAGACGGGTCTGTTGAATCCCGAGTTTTTGCAACAATATGCCATTGAAGGCAGAGAAGCTGACCTCGAGAATGCTTTGCAAAGTGGTGGTGAAAAGCTCGTATCGGGTGGTCTCATCACCGTGAAATCCAGCAGAAGTGGGGCAGAGAAGAAGCATGGGAAGCAGAATGAGTCTGATAAAAGTGGGAAAAAAAGAGGTAAGGATGACCGTGGCTCCAAATCGAGTAAGAAAAGAAAACCATAG
Protein:  
MDDELNVLPISSHIRSISPVPVNEDSEGLSESERELKNLKEELNEDFPVGPLIKKCCTLDQGKAVITFLDAILDKNLRSTVALLAARGRGKSAALGLAIAGAIAAGYSNIFVTAPSPENLKTLFEFVVKGFDAIEYKEHLDYDVVKSVNPEFKKATQLEEQSQASKGVEGSLSGRVFKKIELSESIRYAPADPIETWLNALLCLDVTNSVPSISRLPPTSECDLYYVNRDTLFSYHKDSELFLQRMMALYVSSHYKNSPNDLQLMADAPAHHLFVLLGPVDESRNQLPDILCVIQVALEGQISRKSAMKSLSDGYQPHGDQIPWKFCEQFRDAVFPSLSGARIVRIATHPSAMRLGYGSAAVELLSRYYEGQLTNISELDFDDAEDNPQGQQLRLTEAAEKVSLLEENIKPRTDLPPLLVHLHERRPEKLHYLGVSFGLTLDLFRFWKKHNDDFEVSGSDEWGFFTPFYKDTEPTPSTSDELSKLIKTLLSPYDMGRLKDYTNNLIDFLSISDIVSTLAHLYFQEKIPVALSYVQASILFCMGLQNQDVSYVEEQMKKLERQQILSQFKKVMIKLYKYLYGIASKEIDSALPRLKERELEPHSISVDEDLNDGAKKVEEEMRAKTGLLNPEFLQQYAIEGREADLENALQSGGEKLVSGGLITVKSSRSGAEKKHGKQNESDKSGKKRGKDDRGSKSSKKRKP